Check trans fluid levels. Also verify if the clicking is the transmission or the PTU clicking.So I did the TC off and gave it some more miles to learn. When I do a launch and it goes to shift in to second it hesitates and makes a few clicking noises and then shift. It only does this in launch and not when I'm at like a starting speed. It never did this before the tune. Any other ideas?
Tunes can but don't usually cause the issue. More often than not they bring an underlying problem to light, the increase in power can definitely bring that up.
But please, stay in contact with us and we will remain in contact as well and try to solve this issue as soon as possible.