Jesse,
Now that you have had it running, you can pull codes. If the CID (camshaft position sensor)is bad you should have a code. The Cylinder Identification (CID) sensor can cause the symptoms you describe when it is failing.
This sensor is a $30 part from Auto Zone. If it caused a code, even one time, I would replace it.
Before you replace it make sure you have a good electrical connection. Check the connection for any corrosion, etc.
You need to slow down and approach your problems systematically. Take them one at a time and determine what are the symptoms, and from there determine what is the cause.
For example; you determined that the engine was running rough. You checked the plugs and found the plug wells full of oil. You cleaned out the oil from the plug wells and replaced the plugs and plug wires.
This would solve the rough idle for a short time only, because you have not addressed the cause of the problem. The plug well seals are allowing oil to leak into the plug wells.
The seals need to be replaced or the new plugs and wires will be ruined in a short time. Again, you have not addressed the "Cause" of the problem until you replace the plug well seals.
But, even this is not your immediate problem if you cannot get it to run and continue to run. So, you need to do some more mechanical detective work. Take it one step at a time and listen to what these forum members are telling you.
An engine needs two things to run, gas and spark.
A fuel pressure test will tell you if there is enough fuel pressure at the injectors, right? This would also tell you that the fuel pump and fuel filter are OK, right?
You can test the power pack as described in a current post by a forum member. That post is just above yours or just below. I don't remember. I do remember that it will tell you how to check you power pack.
Then whats next in the "Spark" system?
The plugs and plug wires are new, so you know they are OK, right? OK, what do you want to check next?
The CID? The CPS? Why not check the codes?
Do you understand what I am trying to tell you Jesse? Slow down and think! Make a list of things to check and how to check them. Then check them, and fix whatever fails the test.
If you do not find the problem with the first list, make another list and continue checking and testing. Develope a system.
A good service manual has a system for checking most common problems. If you do not have one you can usually get the information at a library, or from forums like this one.
E-mail me and let me know where you are in Ohio. If you are reasonably close by I may be able to help you. rangerj