FOSHO94,
If it is just surface rust, that is it is not all the way through the metal, you can clean ALL of the rust off of the metal with a wire brush. The easiest way I found is to use a wire brush attachment for a drill. These come in different sizes and shapes, and are available at hardware stores or home centers. Clean the area with something like lacquer thinner, before you begin the work, to remove any grease, oil, or tar, that you do not want to grind into the metal.
Once the metal is cleaned of all rust it can be primed. The sharp edges of the paint in the area worked on should be "feather edged" with something like 360 or 400 grit wet or dry sand paper.
There are more agressive grit papers but you should get experience with something a little less agressive. If you have any deep spots you can fill them with a body putty, but DO NOT use some discount store blue light special body putty (aka Bondo). Get some professional stuff from an auto paint and body supply store. Eastwood (see below) sells a quart size of a quality body filler, tubes of glazing puty, and quarts of primer sealer.
When the body work is complete up to the primer, it must be sealed with a sealer. Sealer/primers are ok, but it is best to use a seperate sealer over the primer. You should be able to get these in spray cans at an auto parts store, or paint and body supply store.
Prime the area again, and sand some more untill the old paint edges are not visible. The area should be smooth. When it is a smooth flat surface put a coat of sealer over it. Now you are ready for color.
Note: Any area that is rusted through should be repaired with metal "mig" welded in place. 3 M (MMM) sells an adhesive that will bond metal to metal as strong as a weld. The product should be available from auto parts stores, or paint and body supply stores. I hva not tried this stuff, so I have no opinion as to its quality, ease to work with, or value.
See
www.eastwood.com (or 1-800-345-1178) for their "Rust Encapsulator", which will prime and seal and neutralize any rust you cannot get at, such as in a weld seam. This stuff works. "Auto Restorer" magazine tested this stuff against several other rust prevention or sealing products and it came out the best. I've been using it for about 10 years, and it works. It comes in black, silver, and a primer red color. You can get pints, quarts, gallons, or 16oz spray cans. You thin it with lacquer thinner.
The above should get you started. rangerj